Local setup

In this section, we will walk you through the steps needed to set up a computational environment on your own machine to run the tutorials (i.e. the widgets will be “alive” and responding to changing inputs).

The steps are:

• Install Git

• Install conda/mamba

• Create a conda environment

Note

If you have access to a JupyterHub (which usually already have git and conda installed), you can follow the steps in Create an conda environment to run the tutorials on the Hub.

Many of the instructions here were inspired by these setup instructions from TU Dresden for biological image analysis.